iCOBRA (version 1.0.2)

fdrnbr: Accessor and replacement functions for fdrnbr slot

Description

Accessor and replacement functions for the fdrnbr slot in an COBRAPerformance or COBRAPlot object.

Usage

fdrnbr(x, ...)
fdrnbr(x, ...) <- value
## S3 method for class 'COBRAPerformance':
fdrnbr(x)
## S3 method for class 'COBRAPerformance,data.frame':
fdrnbr(x) <- value
## S3 method for class 'COBRAPlot,data.frame':
fdrnbr(x) <- value

Arguments

x

An COBRAPerformance or COBRAPlot object.

...

Additional arguments.

value

A data frame giving information about the observed FPR and the number of features called positive for each method and each stratification level, at various adjusted p-value thresholds.

Value

• The accessor function returns a data frame giving information about the observed FPR and the number of features called positive for each method and each stratification level, at various adjusted p-value thresholds.

Examples

data(cobradata_example)
cobraperf <- calculate_performance(cobradata_example,
                                   binary_truth = "status",
                                   aspects = "fdrnbr")
head(fdrnbr(cobraperf))