align.ibd.var

align ibd.var object with relative pairs within pairs.frame object

Method to test genetic linkage with covariates by
regression methods with response IBD sharing for relative
pairs.  Account for correlations of IBD statistics and
covariates for relative pairs within the same pedigree.

Jason Sinnwell

ibdreg

Regression Methods for IBD Linkage with Covariates

align.ibd.var function

<dl><dt>id.df </dt>
<dd>a data.frame containing the three id columns (ped.id, person1.id,
person2.id) from a pairs.frame object</dd><dt>ibd.var </dt>
<dd>an ibd.var object</dd><dt>epsilon</dt>
<dd>cutoff for singular values in a generalized inverse (Ginv)</dd></dl>

Arguments

align ibd.var object with relative pairs within pairs.frame object — align.ibd.var

<dl>

<dt>id.df </dt>
<dd>a data.frame containing the three id columns (ped.id, person1.id,
person2.id) from a pairs.frame object</dd>

<dt>ibd.var </dt>
<dd>an ibd.var object</dd>

<dt>epsilon</dt>
<dd>cutoff for singular values in a generalized inverse (Ginv)</dd>

</dl>

align.ibd.var: align ibd.var object with relative pairs within pairs.frame object

Description

Usage

Value

Arguments