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icd (version 3.1.2)

icd9Comorbid_alt_Taskloop: Simpler comorbidity assignment

Description

Re-written without OpenMP initially, but structured more simply, with the motivation of using modern compiler features and OpenMP 4.5 with 'taskloop' construct. https://developers.redhat.com/blog/2016/03/22/what-is-new-in-openmp-4-5-3/

Usage

icd9Comorbid_alt_Taskloop(icd9df, icd9Mapping, visitId, icd9Field,
  threads = 8L, chunk_size = 256L, omp_chunk_size = 1L)
icd9Comorbid_alt_Taskloop2(icd9df, icd9Mapping, visitId, icd9Field,
  threads = 8L, chunk_size = 256L, omp_chunk_size = 1L)

Arguments

Functions

  • icd9Comorbid_alt_Taskloop2: Taskloop but finish with R transpose

Details

# basic test # use tests/testthat/helper-base.R for two_pts and two_map comorbid(two_pts, two_map, comorbid_fun = icd:::icd9Comorbid_alt_Taskloop)