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icesTAF (version 3.1-1)

Functions to Support the ICES Transparent Assessment Framework

Description

Functions to support the ICES Transparent Assessment Framework to organize data, methods, and results used in ICES assessments. ICES is an organization facilitating international collaboration in marine science.

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Version

Install

install.packages('icesTAF')

Monthly Downloads

490

Version

3.1-1

License

GPL (>= 2)

Maintainer

Arni Magnusson

Last Published

May 24th, 2019

Functions in icesTAF (3.1-1)

cp

Copy Files
icesTAF-package

Functions to Support the ICES Transparent Assessment Framework
latin1.to.utf8

Convert File Encoding
sam2taf

Convert SAM Table to TAF Format
os

Operating System
rnd

Round Columns
period

Period
mkdir

Create Directory
draft.data

Draft DATA.bib
draft.software

Draft SOFTWARE.bib
long2taf

Convert Long Table to TAF Format
file.encoding

File Encoding
lim

Axis Limits
read.taf

Read TAF Table from File
line.endings

Line Endings
msg

Show Message
make

Run R Script If Needed
makeAll

Run All TAF Scripts as Needed
rmdir

Remove Empty Directory
taf.bootstrap

Bootstrap TAF Analysis
sourceTAF

Run TAF Script
flr2taf

Convert FLR Table to TAF Format
taf2xtab

Convert TAF Table to Crosstab Format
summary.taf

Summary Results in TAF Format
taf2long

Convert TAF Table to Long Format
makeTAF

Run TAF Script If Needed
taf.colors

TAF Colors
plus

Rename Plus Group Column
xtab2taf

Convert Crosstab Table to TAF Format
sourceAll

Run All TAF Scripts
process.bib

Process Metadata
sourceDir

Source Directory
zoom

Zoom
taf.skeleton

TAF Skeleton
taf.unzip

Unzip File
taf.library

TAF Library
taf.png

PNG Device
tt

TAF Transpose
write.taf

Write TAF Table to File
catage.long

Catch at Age in Long Format
catage.taf

Catch at Age in TAF Format
catage.xtab

Catch at Age in Crosstab Format
clean

Clean TAF Directories
dos2unix

Convert Line Endings
download

Download File
convert.spaces

Convert Spaces
deps

List Dependencies
div

Divide Columns