gut_microbe

<p>The original nucleotide sequences of this study were deposited to the NCBI
Sequence Read Archive under accession number SRP128619.</p>

datasets

Most existing approaches for network reconstruction can only infer an overall network
and, also, fail to capture a complete set of network properties. To address these issues,
a new model has been developed, which converts static data into their 'dynamic' form.
'idopNetwork' is an 'R' interface to this model, it can inferring informative, dynamic,
omnidirectional and personalized networks. For more information on functional
clustering part, see Kim et al. (2008) <doi:10.1534/genetics.108.093690>,
Wang et al. (2011) <doi:10.1093/bib/bbr032>. For more information on our model,
see Chen et al. (2019) <doi:10.1038/s41540-019-0116-1>, and Cao et al. (2022)
<doi:10.1080/19490976.2022.2106103>.

Ang Dong

idopNetwork

A Network Tool to Dissect Spatial Community Ecology

gut_microbe function

<p>A data frame with 65 rows and 21 column, contain first column as microbe ID:</p>

gut_microbe: gut microbe OTU data (species level)

Description

Usage

Arguments

Format