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indicspecies (version 1.8.0)

Relationship Between Species and Groups of Sites

Description

Functions to assess the strength and statistical significance of the relationship between species occurrence/abundance and groups of sites [De Caceres & Legendre (2009) ]. Also includes functions to measure species niche breadth using resource categories [De Caceres et al. (2011) ].

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Version

Install

install.packages('indicspecies')

Monthly Downloads

2,758

Version

1.8.0

License

GPL (>= 2)

Maintainer

Miquel Caceres

Last Published

February 20th, 2025

Functions in indicspecies (1.8.0)

signassoc

Statistical significance of species site-group associations
strassoc

Strength of species site-group associations
pruneindicators

Determines the best subset of indicators
summary.multipatt

Summarizing multi-level pattern analysis
wetland

Wetland vegetation data set
multipatt

Multi-level pattern analysis
indicators

Indicator analysis for species combinations
nichedispl

Metrics to compare pairs of resource niches
coverage

Coverage of a set of indicators
plotniche

Draws a single resource niche
birds

Birds resource use data
predict.indicators

Predicts site group from indicators
nichecentroid

Resource niche metrics for a single niche
combinespecies

Combines species from a community table
pigeons

Pigeon seed consumption data