parse_inclusion

Parse inclusion of component labels in a predictor expression

internal

Facilitates spatial and general latent Gaussian modeling using
integrated nested Laplace approximation via the INLA package (<https://www.r-inla.org>).
Additionally, extends the GAM-like model class to more general nonlinear predictor
expressions, and implements a log Gaussian Cox process likelihood for
modeling univariate and spatial point processes based on ecological survey data.
Model components are specified with general inputs and mapping methods to the
latent variables, and the predictors are specified via general R expressions,
with separate expressions for each observation likelihood model in
multi-likelihood models. A prediction method based on fast Monte Carlo sampling
allows posterior prediction of general expressions of the latent variables.
Ecology-focused introduction in Bachl, Lindgren, Borchers, and Illian (2019)
<doi:10.1111/2041-210X.13168>.

Finn Lindgren

inlabru

Bayesian Latent Gaussian Modelling using INLA and Extensions

Fabian E. Bachl

David L. Borchers

Daniel Simpson

Lindesay Scott-Howard

Seaton Andy

Suen Man Ho

Roudier Pierre

Meehan Tim

Reddy Peddinenikalva Niharika

Perepolkin Dmytro

parse_inclusion function

<dl><dt>thenames</dt>
<dd>Set of labels to restrict</dd>
<dt>include</dt>
<dd>Character vector of component labels that are needed by the
predictor expression; Default: NULL (include all components that are not
explicitly excluded)</dd>
<dt>exclude</dt>
<dd>Character vector of component labels that are not used by the
predictor expression. The exclusion list is applied to the list
as determined by the <code>include</code> parameter; Default: NULL (do not remove
any components from the inclusion list)</dd></dl>

Arguments

Parse inclusion of component labels in a predictor expression — parse_inclusion

<dl>

<dt>thenames</dt>
<dd>Set of labels to restrict</dd>


<dt>include</dt>
<dd>Character vector of component labels that are needed by the
predictor expression; Default: NULL (include all components that are not
explicitly excluded)</dd>


<dt>exclude</dt>
<dd>Character vector of component labels that are not used by the
predictor expression. The exclusion list is applied to the list
as determined by the <code>include</code> parameter; Default: NULL (do not remove
any components from the inclusion list)</dd>

</dl>

Parse inclusion of component labels in a predictor expression

parse_inclusion: Parse inclusion of component labels in a predictor expression

Description

Usage

Arguments