ibspiked_set1

ibspiked_set2

noise.model.hcd

ib_phospho


  ibspiked_set1 and ibspiked_set2 are objects of class iTRAQ4plexSpectra.
  It contains over 160 protein groups, over 1600 peptides from about 15,000 spectra each,
  mainly from background proteins and three spiked-in Ceruplasmins 
  (CERU_HUMAN, CERU_MOUSE, CERU_RAT).


datasets

isobar.data

isobar provides methods for preprocessing, normalization, and
report generation for the analysis of quantitative mass spectrometry
proteomics data labeled with isobaric tags, such as iTRAQ and TMT.
Features modules for integrating and validating PTM-centric datasets
(isobar-PTM). More information on http://www.ms-isobar.org.

Florian P Breitwieser

isobar

Analysis and quantitation of isobarically tagged MSMS proteomics data

isobar.data function

Format

isobar publication. Acquired on Orbitrap instrument w/ 20 offline-fractions 
  and HCD fragmentation.

Source

ibspiked_set1 and ibspiked_set2 are objects of class iTRAQ4plexSpectra.
  It contains over 160 protein groups, over 1600 peptides from about 15,000 spectra each,
  mainly from background proteins and three spiked-in Ceruplasmins 
  (CERU_HUMAN, CERU_MOUSE, CERU_RAT).

isobar.data: Isobar Data packages

Description

Usage

Arguments

Format

Source

Examples