- par
A numeric vector with length npVar where
npVar is the number of variance parameters, namely
0, 1 or nlevels corresponding to the values
of cov: 0, 1 and 2.
- nlevels
-
Number of levels.
- levels
Character representing the levels.
- lowerSQRT
Logical. When TRUE the (lower) Cholesky
root \(\mathbf{L}\) of the correlation or covariance matrix
\(\mathbf{C}\) is returned instead of the correlation matrix.
- compGrad
Logical. Should the gradient be computed?
- cov
Integer 0, 1 or 2. If cov
is 0, the matrix is a correlation matrix (or its
Cholesky root) i.e. an identity matrix. If cov is 1
or 2, the matrix is a covariance (or its square
root) with constant variance vector for code = 1 and with
arbitrary variance vector for code = 2.