kobe (version 1.3.2)

kobeMFCL: Reads Multifan-CL assessment results and returns stock and harvest rate relative to MSY reference points

Description

Reads in text file generated by MFCL and returns time series or summaries of B:BMSY and F:FMSY. what specifies how data are returned, i.e. sims bootstraps for all years; trks percentiles given by prob; year selected year(s) given by pts; smRY probabilities of being in the kobe quadrants and; wrms bootstraps selected at random. If of length 1 then a data.frame is returned, if >1 then a list of data.frames.

Usage

kobeMFCL(object,dir="", what=c("sims","trks","pts","smry","wrms")[1],  prob=c(0.75,0.5,0.25),year=NULL,nwrms=10)

Arguments

object

character: rep file with results.

dir

character; optional argument identifying directory where file is.

what

character; specifies the form of data returned.

prob

numeric; probabilities with values in [0,1] for percentiles returned if what["trks"] selected.

year

numeric; year(s) for points if what["pts"] selected.

nwrms

numeric; number of trajectories sampled at random to return if what["wrms"] selected.

See Also

kobeAspic,kobe2box,kobeMFCL,kobeSS

Examples

## Not run: 
# 
# kobeMFCL("bft")
# ## End(Not run)