fit_cosinor_model

Fit cosinor model for totality of data

The goal of 'kronos' is to provide an easy-to-use framework to analyse circadian or otherwise rhythmic data using the familiar R linear modelling syntax, while taking care of the trigonometry under the hood.

Thomaz Bastiaanssen

kronos

Microbiome Oriented Circadian Rhythm Analysis Toolkit

Sarah-Jane Leigh

fit_cosinor_model function

<dl><dt>formula</dt>
<dd>A formula. Use the <code>time</code> function to designate which variable represents time.</dd>
<dt>data</dt>
<dd>Input data</dd>
<dt>time</dt>
<dd>A string. Should be the column name containing the time values.</dd>
<dt>verbose</dt>
<dd>A boolean. Toggles whether to print diagnostic information while running. Useful for debugging errors on large datasets.</dd>
<dt>for_pw</dt>
<dd>A boolean. Toggles whether to perform pairwise ANOVAs as a TukeyHSD-like post-hoc.</dd></dl>

Arguments

Fit cosinor model — fit_cosinor_model

<dl>

<dt>formula</dt>
<dd>A formula. Use the <code>time</code> function to designate which variable represents time.</dd>


<dt>data</dt>
<dd>Input data</dd>


<dt>time</dt>
<dd>A string. Should be the column name containing the time values.</dd>


<dt>verbose</dt>
<dd>A boolean. Toggles whether to print diagnostic information while running. Useful for debugging errors on large datasets.</dd>


<dt>for_pw</dt>
<dd>A boolean. Toggles whether to perform pairwise ANOVAs as a TukeyHSD-like post-hoc.</dd>

</dl>

fit_cosinor_model: Fit cosinor model

Description

Usage

Arguments