fastFilter: fastFilter: Subroutine for filtering expression matrix
Description
Author: Zhi Huang
Usage
fastFilter(
RNA,
lowest_percentile_mean = 0.2,
lowest_percentile_variance = 0.2,
var.func = "var"
)
Value
An filtered expression matrix
Arguments
- RNA
an expression matrix (rows: genes; columns: samples)
- lowest_percentile_mean
a float value range 0-1
- lowest_percentile_variance
a float value range 0-1
- var.func
specify variance function