fix.parameters

Creates matrix with appropriate structure for fixing real parameters in a
crm model for a specified set of capture histories and occasions.

Functions for fitting various models to capture-recapture data
including mixed-effects Cormack-Jolly-Seber(CJS) and multistate models and
the multi-variate state model structure for survival
estimation and POPAN structured Jolly-Seber models for abundance estimation.
There are also Hidden Markov model (HMM) implementations of CJS and multistate
models with and without state uncertainty and a simulation capability for HMM
models.

Jeff Laake

marked

Mark-Recapture Analysis for Survival and Abundance Estimation

fix.parameters function

<dl><dt>x</dt>
<dd>processed data list</dd>
<dt>subset</dt>
<dd>logical expression for set of animals; used in subset function</dd>
<dt>occasions</dt>
<dd>vector of occasion numbers</dd>
<dt>values</dt>
<dd>either single or vector of values; if latter, must match
length of occasions</dd></dl>

Arguments

Author

Fixing real parameters in crm models — fix.parameters

<dl>

<dt>x</dt>
<dd>processed data list</dd>


<dt>subset</dt>
<dd>logical expression for set of animals; used in subset function</dd>


<dt>occasions</dt>
<dd>vector of occasion numbers</dd>


<dt>values</dt>
<dd>either single or vector of values; if latter, must match
length of occasions</dd>

</dl>

fix.parameters: Fixing real parameters in crm models

Description

Usage

Value

Arguments

Author