"latitude"
: Latitude (in degrees) given as input.
"topography"
: Vector with elevation, slope and aspect given as input.
"weather"
: A copy of the input weather data frame.
"growthInput"
: A copy of the object x
of class growthInput
given as input.
"growthOutput"
: An copy of the final state of the object x
of class growthInput
.
"WaterBalance"
: A data frame where different water balance variables (see spwb
).
"EnergyBalance"
: A data frame with the daily values of energy balance components for the soil and the canopy (only for transpirationMode = "Sperry"
or transpirationMode = "Sureau"
; see spwb
).
"CarbonBalance"
: A data frame where different stand-level carbon balance components (gross primary production, maintenance respiration, synthesis respiration and net primary production), all in g C · m-2.
"BiomassBalance"
: A data frame with the daily values of stand biomass balance components (in g dry · m-2.
"Temperature"
: A data frame with the daily values of minimum/mean/maximum temperatures for the atmosphere (input), canopy and soil (only for transpirationMode = "Sperry"
or transpirationMode = "Sureau"
; see spwb
).
"Soil"
: A data frame where different soil variables (see spwb
).
"Stand"
: A data frame where different stand-level variables (see spwb
).
"Plants"
: A list of daily results for plant cohorts (see spwb
).
"SunlitLeaves"
and "ShadeLeaves"
: A list with daily results for sunlit and shade leaves (only for transpirationMode = "Sperry"
or transpirationMode = "Sureau"
; see spwb
).
"LabileCarbonBalance"
: A list of daily labile carbon balance results for plant cohorts, with elements:
"GrossPhotosynthesis"
: Daily gross photosynthesis per dry weight of living biomass (g gluc · g dry-1).
"MaintentanceRespiration"
: Daily maintenance respiration per dry weight of living biomass (g gluc · g dry-1).
"GrowthCosts"
: Daily growth costs per dry weight of living biomass (g gluc · g dry-1).
"RootExudation"
: Root exudation per dry weight of living biomass (g gluc · g dry-1).
"LabileCarbonBalance"
: Daily labile carbon balance (photosynthesis - maintenance respiration - growth costs - root exudation) per dry weight of living biomass (g gluc · g dry-1).
"SugarLeaf"
: Sugar concentration (mol·l-1) in leaves.
"StarchLeaf"
: Starch concentration (mol·l-1) in leaves.
"SugarSapwood"
: Sugar concentration (mol·l-1) in sapwood.
"StarchSapwood"
: Starch concentration (mol·l-1) in sapwood.
"SugarTransport"
: Average instantaneous rate of carbon transferred between leaves and stem compartments via floem (mol gluc·s-1).
"PlantBiomassBalance"
: A list of daily plant biomass balance results for plant cohorts, with elements:
"StructuralBiomassBalance"
: Daily structural biomass balance (g dry · m-2).
"LabileBiomassBalance"
: Daily labile biomass balance (g dry · m-2).
"PlantBiomassBalance"
: Daily plant biomass balance, i.e. labile change + structural change (g dry · m-2).
"MortalityBiomassLoss"
: Biomass loss due to mortality (g dry · m-2).
"CohortBiomassBalance"
: Daily cohort biomass balance (including mortality) (g dry · m-2).
"PlantStructure"
: A list of daily area and biomass values for compartments of plant cohorts, with elements:
"LeafBiomass"
: Daily amount of leaf structural biomass (in g dry) for an average individual of each plant cohort.
"SapwoodBiomass"
: Daily amount of sapwood structural biomass (in g dry) for an average individual of each plant cohort.
"FineRootBiomass"
: Daily amount of fine root biomass (in g dry) for an average individual of each plant cohort.
"LeafArea"
: Daily amount of leaf area (in m2) for an average individual of each plant cohort.
"SapwoodArea"
: Daily amount of sapwood area (in cm2) for an average individual of each plant cohort.
"FineRootArea"
: Daily amount of fine root area (in m2) for an average individual of each plant cohort.
"HuberValue"
: The ratio of sapwood area to (target) leaf area (in cm2/m2).
"RootAreaLeafArea"
: The ratio of fine root area to (target) leaf area (in m2/m2).
"DBH"
: Diameter at breast height (in cm) for an average individual of each plant cohort.
"Height"
: Height (in cm) for an average individual of each plant cohort.
"GrowthMortality"
: A list of daily growth and mortality rates for plant cohorts, with elements:
"LAgrowth"
: Leaf area growth (in m2·day-1) for an average individual of each plant cohort.
"SAgrowth"
: Sapwood area growth rate (in cm2·day-1) for an average individual of each plant cohort.
"FRAgrowth"
: Fine root area growth (in m2·day-1) for an average individual of each plant cohort.
"StarvationRate"
: Daily mortality rate from starvation (ind/d-1).
"DessicationRate"
: Daily mortality rate from dessication (ind/d-1).
"MortalityRate"
: Daily mortality rate (any cause) (ind/d-1).
"subdaily"
: A list of objects of class growth_day
, one per day simulated (only if required in control
parameters, see defaultControl
).