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metaMA (version 3.1.3)

Meta-Analysis for MicroArrays

Description

Combination of either p-values or modified effect sizes from different studies to find differentially expressed genes.

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Version

Install

install.packages('metaMA')

Monthly Downloads

274

Version

3.1.3

License

GPL

Maintainer

Samuel Blanck

Last Published

April 12th, 2022

Functions in metaMA (3.1.3)

IDDIRR

Integration-driven Discovery and Integration-driven Revision Rates
EScombination.paired

Effect size combination for paired data
pvalcombination.paired

P-value combination for paired data
pvalcombination

P-value combination for unpaired data
effectsize

Calculates effect sizes from given t or moderated t statistics
row.ttest.stat

Row t-tests
rowVars

Row variance of an array
row.ttest.statp

Row paired t-tests
Singhdata

Singh dataset
metaMA-package

Meta-analysis for MicroArrays
directEScombi

Direct effect size combination
directpvalcombi

Direct p-value combination
EScombination

Effect size combination for unpaired data
calcfit2Diffrep

Empirical Bayes statistics from limma analysis with unpaired data