metaSeq-package:
Meta-analysis of RNA-Seq count data in multiple studies
Description
Meta-analysis for multiple studies's RNA-Seq count data. In this package, probability of gene differential is calculated by NOISeq, which is customized for one-sided test. One-sided probabilities are integrated by Fisher's method (without weighting) or Stouffer's method (with weighting by sample-size). P-values or probabilities calculated by non-NOISeq methods are also applicable by other.oneside.pvalues
.
Details
Package: |
metaSeq |
Type: |
Package |
Version: |
1.3.2 |
Date: |
2013-12-2 |
License: |
Artistic-2.0 |
References
Tarazona, S. and Garcia-Alcalde, F. and Dopazo, J. and Ferrer, A. and Conesa, A. (2011) Differential expression in RNA-seq: A matter of depth. Genome Research,
21(12): 2213-2223