plot_tsne

object

A column in `@sampleData` to show the color of points.

color

A column in `@sampleData` to show the shape of points.

shape

size

Plot t-distributed stochastic neighbor embedding. See more details in <code><a rd-options="M3C" href="/link/tsne?package=metabolomicsR&version=1.0.0&to=M3C" data-mini-rdoc="M3C::tsne">tsne</a></code>.

Tools to preprocess, analyse, and visualize metabolomics data.
We included a set of functions for sample and metabolite quality control,
outlier detection, missing value imputation, dimensional reduction, normalization,
data integration, regression, metabolite annotation, enrichment analysis,
and visualization of data and results. The package is designed to be a comprehensive R package
that can be easily used by researchers with basic R programming skills.
The framework designed here is versatile and is extensible to other various methods.

Xikun Han

metabolomicsR

Tools for Metabolomics Data

plot_tsne function

Plot t-distributed stochastic neighbor embedding. See more details in <code><a rd-options='M3C' href='tsne'>tsne</a></code>.

plot_tsne: plot tSNE

Description

Usage

Arguments

Value