metacoder (version 0.3.7)

get_data: Get data in a taxmap object by name

Description

Given a vector of names, return a list of data (usually lists/vectors) contained in a [taxonomy()] or [taxmap()] object. Each item will be named by taxon ids when possible.

obj$get_data(name = NULL, ...)
get_data(obj, name = NULL, ...)

Value

`list` of vectors or lists. Each vector or list will be named by associated taxon ids if possible.

Arguments

obj

A [taxonomy()] or [taxmap()] object

name

(`character`) Names of data to return. If not supplied, return all data listed in [all_names()].

...

Passed to [all_names()]. Used to filter what kind of data is returned (e.g. columns in tables or function output?) if `name` is not supplied or what kinds are allowed if `name` is supplied.

See Also

Other NSE helpers: all_names(), data_used, names_used

Examples

# Get specific values
get_data(ex_taxmap, c("reaction", "n_legs", "taxon_ranks"))

# Get all values
get_data(ex_taxmap)