parse_newick

Parse a Newick file into a taxmap object.

A set of tools for parsing, manipulating, and graphing data
classified by a hierarchy (e.g. a taxonomy).

Zachary Foster

metacoder

Tools for Parsing, Manipulating, and Graphing Taxonomic
Abundance Data

Niklaus Grunwald

Rob Gilmore

parse_newick function

<dl><dt>file</dt>
<dd>(<code>character</code> of length 1) The file path to the input file. Either <code>file</code> or <code>text</code> must be supplied but not both.</dd>
<dt>text</dt>
<dd>(<code>character</code> of length 1) The raw text to parse. Either <code>file</code> or <code>text</code> must be supplied but not both.</dd></dl>

Arguments

Parse a Newick file — parse_newick

<dl>

<dt>file</dt>
<dd>(<code>character</code> of length 1) The file path to the input file. Either <code>file</code> or <code>text</code> must be supplied but not both.</dd>


<dt>text</dt>
<dd>(<code>character</code> of length 1) The raw text to parse. Either <code>file</code> or <code>text</code> must be supplied but not both.</dd>

</dl>

parse_newick: Parse a Newick file

Description

Usage

Value

Arguments

Details

See Also