parse_summary_seqs

Extract statistics from the command line output of mothur command <code>summary.seqs</code> and
return the results in a <code>data.frame</code>

internal

A set of tools for parsing, manipulating, and graphing data
classified by a hierarchy (e.g. a taxonomy).

Zachary Foster

metacoder

Tools for Parsing, Manipulating, and Graphing Taxonomic
Abundance Data

Niklaus Grunwald

Rob Gilmore

parse_summary_seqs function

<dl><dt>text</dt>
<dd>The text output of <code>summary.seqs</code></dd>
<dt>file</dt>
<dd>The path to saved output of <code>summary.seqs</code></dd></dl>

Arguments

Parse summary.seqs output — parse_summary_seqs

<dl>

<dt>text</dt>
<dd>The text output of <code>summary.seqs</code></dd>


<dt>file</dt>
<dd>The path to saved output of <code>summary.seqs</code></dd>

</dl>

parse_summary_seqs: Parse summary.seqs output

Description

Usage

Value

Arguments