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metafor (version 1.9-7)

Meta-Analysis Package for R

Description

A comprehensive collection of functions for conducting meta-analyses in R. The package includes functions to calculate various effect sizes or outcome measures, fit fixed-, random-, and mixed-effects models to such data, carry out moderator and meta-regression analyses, and create various types of meta-analytical plots (e.g., forest, funnel, radial, L'Abbe, Baujat plots). For meta-analyses of binomial and person-time data, the package also provides functions that implement specialized methods, including the Mantel-Haenszel method, Peto's method, and a variety of suitable generalized linear (mixed-effects) models (i.e., mixed-effects (conditional) logistic and Poisson regression models). Finally, the package provides functionality for fitting meta-analytic multivariate/multilevel models that account for non-independent sampling errors and/or true effects (e.g., due to the inclusion of multiple treatment studies, multiple endpoints, or other forms of clustering). Network meta-analyses and meta-analyses accounting for known correlation structures (e.g., due to phylogenetic relatedness) can also be conducted.

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Version

Install

install.packages('metafor')

Monthly Downloads

38,438

Version

1.9-7

License

GPL (>= 2)

Maintainer

Wolfgang Viechtbauer

Last Published

May 22nd, 2015

Functions in metafor (1.9-7)

baujat

Baujat Plots for 'rma' Objects
dat.colditz1994

Studies on the Effectiveness of the BCG Vaccine Against Tuberculosis
blup

Best Linear Unbiased Predictions for 'rma.uni' Objects
dat.hasselblad1998

Studies on the Effectiveness of Counseling for Smoking Cessation
bldiag

Construct Block Diagonal Matrix
dat.berkey1998

Studies on Treatments for Periodontal Disease
dat.senn2013

Studies on the Effectiveness of Glucose-Lowering Agents
dat.gibson2002

Studies on the Effectiveness of Self-Management Education and Regular Medical Review for Adults with Asthma
anova.rma

Likelihood Ratio and Wald-Type Tests for 'rma' Objects
dat.yusuf1985

Studies of Beta Blockers During and After Myocardial Infarction
dat.nielweise2008

Studies on Anti-Infective-Treated Central Venous Catheters for Prevention of Catheter-Related Bloodstream Infections
dat.linde2005

Studies on the Effectiveness of St. John's Wort for Treating Depression
dat.bonett2010

Studies on the Reliability of the CES-D Scale
forest.default

Forest Plots (Default Method)
addpoly

Add Polygons to Forest Plots
fitted.rma

Fitted Values for 'rma' Objects
addpoly.default

Add Polygons to Forest Plots (Default Method)
dat.hine1989

Studies on Prophylactic Use of Lidocaine After a Heart Attack
print.fsn

Print Method for 'fsn' Objects
dat.konstantopoulos2011

Studies on the Effects of Modified School Calendars on Student Achievement
coef.rma

Extract the Model Coefficients and Coefficient Table from 'rma' and 'summary.rma' Objects
print.escalc

Print and Summary Methods for 'escalc' Objects
dat.mcdaniel1994

Studies on the Validity of Employment Interviews
dat.fine1993

Studies on Radiation Therapy with or without Adjuvant Chemotherapy in Patients with Malignant Gliomas
model.matrix.rma

Model Matrix for 'rma' Objects
replmiss

Replace Missing Values in a Vector
cumul

Cumulative Meta-Analysis for 'rma' Objects
dat.debruin2009

Studies on Standard Care Quality and HAART-Adherence
print.ranktest.rma

Print Method for 'ranktest.rma' Objects
metafor.news

Read News File of the Metafor Package
coef.permutest.rma.uni

Extract the Model Coefficient Table from 'permutest.rma.uni' Objects
predict.rma

Predicted Values for 'rma' Objects
dat.hackshaw1998

Studies on Lung Cancer Risk from ETS Exposure
dat.bangertdrowns2004

Studies on the Effectiveness of Writing-to-Learn Interventions
confint.rma.uni

Confidence Intervals for 'rma' Objects
hatvalues.rma.mv

Hat values for 'rma.mv' Objects
dat.pritz1997

Studies on the Effectiveness of Hyperdynamic Therapy for Treating Cerebral Vasospasm
addpoly.rma

Add Polygons to Forest Plots (Method for 'rma' Objects)
print.anova.rma

Print Method for 'anova.rma' Objects
influence.rma.uni

Outlier and Influential Case Diagnostics for 'rma.uni' Objects
fsn

Fail-Safe N Analysis (File Drawer Analysis)
labbe

L'Abbe Plots for 'rma' Objects
dat.bourassa1996

Studies on the Association between Handedness and Eye-Dominance
leave1out

Leave-One-Out Diagnostics for 'rma' Objects
permutest

Permutation Tests for 'rma.uni' Objects
forest.cumul.rma

Forest Plots (Method for 'cumul.rma' Objects)
plot.rma.uni

Plot Method for 'rma' Objects
dat.nielweise2007

Studies on Anti-Infective-Treated Central Venous Catheters for Prevention of Catheter-Related Bloodstream Infections
dat.riley2003

Studies on MYC-N as a Prognostic Marker for Neuroblastoma
metafor-package

Metafor: A Meta-Analysis Package for R
print.hc.rma.uni

Print Method for 'hc.rma.uni' Objects
radial

Radial (Galbraith) Plots for 'rma' Objects
transf

Transformation Function
vcov.rma

Extract the Variance-Covariance Matrix of the Parameter Estimates from 'rma' Objects
dat.pignon2000

Studies on the Effectiveness of Locoregional Treatment plus Chemotherapy for Head and Neck Squamous-Cell Carcinoma
hc

Meta-Analysis based on the Method by Henmi and Copas (2010)
ranktest

Rank Correlation Test for Funnel Plot Asymmetry for 'rma' Objects
forest.rma

Forest Plots (Method for 'rma' Objects)
residuals.rma

Residual Values based on 'rma' Objects
plot.cumul.rma

Plot Method for 'cumul.rma' Objects
print.list.rma

Print Method for 'list.rma' Objects
funnel

Funnel Plots for 'rma' Objects
trimfill

Trim and Fill Analysis for 'rma.uni' Objects
to.table

Convert Data from Vector to Table Format
dat.collins1985b

Studies on the Effects of Diuretics in Pregnancy
dat.begg1989

Studies on Bone-Marrow Transplantation versus Chemotherapy for the Treatment of Leukemia
forest

Forest Plots
rma.glmm

Meta-Analysis via Generalized Linear (Mixed-Effects) Models
qqnorm.rma.uni

Normal QQ Plots for 'rma' Objects
profile.rma.uni

Profile Plots for 'rma' Objects
rma.uni

Meta-Analysis via Linear (Mixed-Effects) Models
rma.mv

Meta-Analysis via Multivariate/Multilevel Linear (Mixed-Effects) Models
fitstats

Fit Statistics and Information Criteria for 'rma' Objects
escalc

Calculate Effect Sizes and Outcome Measures
update.rma

Model Updating for 'rma' Objects
llplot

Log-Likelihood Plot of a Parameter Corresponding to an Outcome or Effect Size Measure
regtest

Regression Test for Funnel Plot Asymmetry for 'rma' Objects
weights.rma.uni

Compute Weights for 'rma' Objects
print.confint.rma

Print Method for 'confint.rma' Objects
plot.infl.rma.uni

Plot Method for 'infl.rma.uni' Objects
dat.molloy2014

Studies on the Relationship between Conscientiousness and Medication Adherence
rma.mh

Meta-Analysis via the Mantel-Haenszel Method
rma.peto

Meta-Analysis via Peto's Method
dat.hart1999

Studies on the Effectiveness of Warfarin for Preventing Strokes
to.long

Convert Data from Vector to Long Format
dat.collins1985a

Studies on the Treatment of Upper Gastrointestinal Bleeding by a Histamine H2 Antagonist
print.regtest.rma

Print Method for 'regtest.rma' Objects
print.rma.uni

Print and Summary Methods for 'rma' Objects
dat.curtis1998

Studies on the Effects of Elevated CO2 Levels on Woody Plant Mass
dat.lee2004

Studies on Acupoint P6 Stimulation for Preventing Nausea
print.permutest.rma.uni

Print Method for 'permutest.rma.uni' Objects
dat.ishak2007

Studies on Deep-Brain Stimulation
dat.raudenbush1985

Studies on Assessing the Effects of Teacher Expectations on Pupil IQ
dat.normand1999

Studies on the Length of Hospital Stay of Stroke Patients