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metagenomeSeq (version 1.14.0)

calcNormFactors: Cumulative sum scaling (css) normalization factors

Description

Return a vector of the the sum up to and including a quantile.

Usage

calcNormFactors(obj, p = cumNormStatFast(obj))

Arguments

obj
An MRexperiment object or matrix.
p
The pth quantile.

Value

Vector of the sum up to and including a sample's pth quantile.

See Also

fitZig cumNormStatFast cumNorm

Examples

Run this code

data(mouseData)
head(calcNormFactors(mouseData))

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