calcShrinkParameters

A matrix of fits as outputted by calcZeroComponent or calcPosComponent

coef

mins2

Vector of features to exclude when shrinking

exclude


Calculate the shrunken variances and variance of parameters of interest across features.


metagenomeSeq is designed to determine features (be it
Operational Taxanomic Unit (OTU), species, etc.) that are
differentially abundant between two or more groups of multiple
samples. metagenomeSeq is designed to address the effects of
both normalization and under-sampling of microbial communities
on disease association detection and the testing of feature
correlations.

calcShrinkParameters: Calculate shrinkage parameters

Description

Usage

Arguments

See Also