methylKit (version 0.99.2)

getDBPath: Get path to database of the methylDB objects

Description

The function returns the path to the flat file database that stores the data of the methylRawDB, methylRawListDB, methylBaseDB or methylDiffDB objects.

Usage

getDBPath(x)
# S4 method for methylRawListDB
getDBPath(x)
# S4 method for methylBaseDB
getDBPath(x)
# S4 method for methylRawDB
getDBPath(x)
# S4 method for methylDiffDB
getDBPath(x)

Arguments

x

an methylBaseDB,methylRawDB, methylRawListDB or methylDiffDB object

Examples

# NOT RUN {
data(methylKit)

methylBaseDB.obj <- unite(methylRawList.obj,save.db=TRUE,dbdir="methylDB")


#The path to the database is returned
getDBPath(methylBaseDB.obj)


# remove Database again
rm(methylBaseDB.obj)
unlink("methylDB",recursive=TRUE)

# }