methylMnM-package

methylMnM


M&M was developed for analyzing data derived from methylated DNA immunoprecipitation (MeDIP) experiments followed by sequencing (MeDIP-Seq) and
the digestions with the methyl-sensitive restriction enzymes (MRE-Seq). 
	Nevertheless, functionalities like the quality controls may be applied to other types of sequencing data (e.g. ChIP-Seq). 
	MeDIP-MRE (methylMnM) test which combine the two differential techniques
(MeDIP-seq and MRE-seq) data to detecting the differentially methylation level of CpG.


 package

To give the exactly p-value and q-value of MeDIP-seq and MRE-seq data for different samples comparation.

Yan Zhou

detect different methylation level (DMR)

methylMnM-package function

M&M was developed for analyzing data derived from methylated DNA immunoprecipitation (MeDIP) experiments followed by sequencing (MeDIP-Seq) and
the digestions with the methyl-sensitive restriction enzymes (MRE-Seq). 
	Nevertheless, functionalities like the quality controls may be applied to other types of sequencing data (e.g. ChIP-Seq). 
	MeDIP-MRE (methylMnM) test which combine the two differential techniques
(MeDIP-seq and MRE-seq) data to detecting the differentially methylation level of CpG.

methylMnM-package: MeDIP-Seq and MRE-Seq data analysis

Description

Arguments

Details

References