The dotsignif glyph is the same as the dot glyphic, but adds the option of testing for significants and overlaying the dot with an "X" the dot's value is. The dot is placed using the data in column name/number in the statsDFrame user provided data. The data in col2 is tested to determine if the dot's value is significant. The comparison is done against the standard pvalue of 0.05. This value can be changed in the details call parmater. The value of the dot is in the column named/numbers in the panelDesc data.frame's col1 in the statsDFrame data.frame. The dot is considered significant if the value provided in statsDFrame column referenced by the column name/number provided in the col2 value is greater than the pvalue variable. The default pvalue is 0.05. If the col2 referenced data is > then the reference pvalue (0.05), the an "X" is overploted on the dot. The range of the data provided is used to set the range of the X-Axis. The dot is plotted in line with the associated area's color in the group/row. If the median consist of only a single area and dot, only one area row is plotted. The col1 and col2 column names/numbers must be provided and the data in the statsDFrame must be numeric values. The statsDFrame columns can be used to sort the order of the areas using the sortVar call parameter.
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Jim Pearson, StatNet Consulting, LLC, Gaithersburg, MD
The col1 row in the panelDesc parameter is indexed by j to obtain the data column's name/number of the data in the statsDFrame data.frame to plot the dot. The data in the statsDFrame referred to by col2 is compared with the set pvalue to determine if the value of the dot is significant. If it is, an "X" is ploted over the dot to indicate significance. j is used to index into panelDesc to get the user specified lab1, lab2, lab3, lab4, refval, and reftxt information to create the column headers, trailers, and reference information. An X-axis is drawn above and below the column based on the data provided in the col1 column of the statsDFrame by the user.
For the dotsignif glyph, the col1 and col2 values of column name/numbers must referrence columns in the statsDFrame data.frame and the data in these columns must be numeric.
panelDesc rows not used by the glyph should be set to NA. The dotsignif glyph does not use the col3, panelData, and parm rows.
The following is an example of a section of a boxplot glyph column in a linked micromap:
The statsDFrame and panelDesc data.frames reside in the global environment and automatically accessible to the process along with several other major structures.
micromapST