gtrack.liftover

Imports a track from another assembly.

~track

~chain

~liftover

A toolkit for analysis of genomic data. The 'misha' package
implements an efficient data structure for storing genomic data, and
provides a set of functions for data extraction, manipulation and
analysis. Some of the 2D genome algorithms were described in Yaffe and Tanay
(2011) <doi:10.1038/ng.947>.

Aviezer Lifshitz

misha

Toolkit for Analysis of Genomic Data

Misha Hoichman

Eitan Yaffe

Amos Tanay

Weizmann Institute of Science 

gtrack.liftover function

<dl><dt>track</dt>
<dd>name of a created track</dd>
<dt>description</dt>
<dd>a character string description</dd>
<dt>src.track.dir</dt>
<dd>path to the directory of the source track</dd>
<dt>chain</dt>
<dd>name of chain file or data frame as returned by
'gintervals.load_chain'</dd></dl>

Arguments

Imports a track from another assembly — gtrack.liftover

<dl>

<dt>track</dt>
<dd>name of a created track</dd>


<dt>description</dt>
<dd>a character string description</dd>


<dt>src.track.dir</dt>
<dd>path to the directory of the source track</dd>


<dt>chain</dt>
<dd>name of chain file or data frame as returned by
'gintervals.load_chain'</dd>

</dl>

gtrack.liftover: Imports a track from another assembly

Description

Usage

Value

Arguments

Details

See Also