Learn R Programming

mixOmics (version 5.0-3)

valid: Compute validation criterion for PLS, sPLS, PLS-DA and sPLS-DA

Description

The valid function has been supersided by the perf function to evaluate the performance of the PLS, sPLS, PLS-DA and sPLS-DA methods. See ?perf for more details

Usage

valid(object, ...)

Arguments

object
object of class inheriting from "pls", "plsda", "spls" or "splsda".
...
arguments to pass to nearZeroVar.

encoding

latin1

References

Tenenhaus, M. (1998). La r?gression PLS: th?orie et pratique. Paris: Editions Technic.

L? Cao, K. A., Rossouw D., Robert-Grani?, C. and Besse, P. (2008). A sparse PLS for variable selection when integrating Omics data. Statistical Applications in Genetics and Molecular Biology 7, article 35.

Mevik, B.-H., Cederkvist, H. R. (2004). Mean Squared Error of Prediction (MSEP) Estimates for Principal Component Regression (PCR) and Partial Least Squares Regression (PLSR). Journal of Chemometrics 18(9), 422-429.

See Also

perf, predict and http://www.math.univ-toulouse.fr/~biostat/mixOmics/ for more details.