mlr3measures (version 1.0.0)

fdr: False Discovery Rate

Description

Measure to compare true observed labels with predicted labels in binary classification tasks.

Usage

fdr(truth, response, positive, na_value = NaN, ...)

Value

Performance value as numeric(1).

Arguments

truth

(factor())
True (observed) labels. Must have the exactly same two levels and the same length as response.

response

(factor())
Predicted response labels. Must have the exactly same two levels and the same length as truth.

positive

(character(1))
Name of the positive class.

na_value

(numeric(1))
Value that should be returned if the measure is not defined for the input (as described in the note). Default is NaN.

...

(any)
Additional arguments. Currently ignored.

Meta Information

• Type: "binary"

• Range: \([0, 1]\)

• Minimize: TRUE

• Required prediction: response

Details

The False Discovery Rate is defined as $$ \frac{\mathrm{FP}}{\mathrm{TP} + \mathrm{FP}}. $$

This measure is undefined if TP + FP = 0.

References

https://en.wikipedia.org/wiki/Template:DiagnosticTesting_Diagram

See Also

Other Binary Classification Measures: auc(), bbrier(), dor(), fbeta(), fn(), fnr(), fomr(), fp(), fpr(), gmean(), gpr(), npv(), ppv(), prauc(), tn(), tnr(), tp(), tpr()

Examples

set.seed(1)
lvls = c("a", "b")
truth = factor(sample(lvls, 10, replace = TRUE), levels = lvls)
response = factor(sample(lvls, 10, replace = TRUE), levels = lvls)
fdr(truth, response, positive = "a")