downsizeGC

: raw read count matrix with gene_ids as rownames

data

: default 11e6, the downsizing level number of reads to be selected randomly.

level

: default 30, the number of times the drawing is performed. Usually 30 or 10 to speed things out

repetitions

: default is FALSE prints the status of downsizing

silent


This function takes a matrix with raw reads counts and computes the number of genes
at a given downsizing level a given number of times.


'MetaOMineR' suite is a set of R packages that offers many functions and modules needed for the analyses
of quantitative metagenomics data. 'momr' is the core package and contains routines for biomarker identification and exploration.
Developed since the beginning of field, 'momr' has evolved and is structured around the different modules
such as preprocessing, analysis, vizualisation, etc. See package help for more information.

downsizeGC: downsizeGC

Description

Usage

Arguments

Value

Details