downsizeMatrix

: raw read count matrix with gene_ids as rownames

data

: default 11E06, the downsizing levels number of reads to be selected randomly.

level

: default 1, This can be also computed several times, but one is the error minimal downsizing strategy

repetitions

: default is FALSE prints the status of downsizing

silent


takes a matrix with raw read gene counts and converts it to a downsized matrix with identical number of mapped reads
     for each sample (column)


'MetaOMineR' suite is a set of R packages that offers many functions and modules needed for the analyses
of quantitative metagenomics data. 'momr' is the core package and contains routines for biomarker identification and exploration.
Developed since the beginning of field, 'momr' has evolved and is structured around the different modules
such as preprocessing, analysis, vizualisation, etc. See package help for more information.

downsizeMatrix: downsizeMatrix

Description

Usage

Arguments

Value

Details