extractProfiles

genebag

: raw count or frequency matrix with genes_ids as rawnames

data

: default 15000, maximum number of profiles to be extracted

size.max

: default 1, the minimal size threshold above which a group of genes is selected.
This is used to extract multiple profiles and filtering the list with a minimal number of genes

size.min

: default TRUE, detailling and following computation progress

silent


This function extracts the profiles from a gene profile matrix of a group of genes or a list
of groups of genes. It can also restrict the size of the result


'MetaOMineR' suite is a set of R packages that offers many functions and modules needed for the analyses
of quantitative metagenomics data. 'momr' is the core package and contains routines for biomarker identification and exploration.
Developed since the beginning of field, 'momr' has evolved and is structured around the different modules
such as preprocessing, analysis, vizualisation, etc. See package help for more information.

extractProfiles: extractProfiles

Description

Usage

Arguments

Value

Details