Visualized scores of data variation within a given MGS cluster as well as the barcode of the MGS.
A subset of 50 most connected genes is also plotted the same way.
Usage
plotMGSQuality(dat, main = "mgs", scores = TRUE)
Arguments
dat
: a matrix where operations will be performed on the columns. Please transpose if operations
are needed in the rows. This is typically an MGS frequency matrix with genes in the rows.
main
: the name of the plot
scores
: weather the function should return the computed scores or not. By default is TRUE.
Value
a matrix of results where scores are in the columns