compare_models

A tibble of model objects, generally output of
<code><a rd-options="" href="/link/fit_models?package=monocle3&version=1.0.0" data-mini-rdoc="monocle3::fit_models">fit_models</a></code>, to be compared with <code>model_tbl_reduced</code>

model_tbl_full

A tibble of model objects, generally output of
<code><a rd-options="" href="/link/fit_models?package=monocle3&version=1.0.0" data-mini-rdoc="monocle3::fit_models">fit_models</a></code>, to be compared with <code>model_tbl_full</code>.

model_tbl_reduced

Compares goodness of fit for two ways of fitting a set of genes' expression

Monocle 3 performs clustering, differential expression and
trajectory analysis for single-cell expression experiments. It orders
individual cells according to progress through a biological process,
without knowing ahead of time which genes define progress through that
process. Monocle 3 also performs differential expression analysis,
clustering, visualization, and other useful tasks on single-cell expression
data.  It is designed to work with RNA-Seq data, but could be used with
other types as well.

Cole Trapnell

monocle3

Clustering, differential expression, and trajectory analysis for single-
cell RNA-Seq

compare_models function

A tibble of model objects, generally output of
<code><a rd-options='' href='fit_models'>fit_models</a></code>, to be compared with <code>model_tbl_reduced</code>

A tibble of model objects, generally output of
<code><a rd-options='' href='fit_models'>fit_models</a></code>, to be compared with <code>model_tbl_full</code>.

compare_models: Compares goodness of fit for two ways of fitting a set of genes' expression

Description

Usage

Arguments