load_mtx_data

Path to the .mtx matrix market file.

mat_path

gene_anno_path

cell_anno_path

UMI per cell cutoff, default is 100.

umi_cutoff

Load data from matrix market format

Monocle 3 performs clustering, differential expression and
trajectory analysis for single-cell expression experiments. It orders
individual cells according to progress through a biological process,
without knowing ahead of time which genes define progress through that
process. Monocle 3 also performs differential expression analysis,
clustering, visualization, and other useful tasks on single-cell expression
data.  It is designed to work with RNA-Seq data, but could be used with
other types as well.

load_mtx_data: Load data from matrix market format

Description

Usage

Arguments

Value