morse (version 3.3.4)

plotDoseResponse.survDataCstExp: Plot dose-response from survData objects

Description

This is the generic plotDoseResponse S3 method for the survData class. It plots the survival probability as a function of concentration at a given target time.

Usage

# S3 method for survDataCstExp
plotDoseResponse(
  x,
  xlab = "Concentration",
  ylab = "Survival probability",
  main = NULL,
  target.time = NULL,
  style = "ggplot",
  log.scale = FALSE,
  remove.someLabels = FALSE,
  addlegend = TRUE,
  ...
)

Value

a plot of class ggplot

Arguments

x

an object of class survData

xlab

a label for the \(X\)-axis, by default Concentration

ylab

a label for the \(Y\)-axis, by default Survival probability

main

main title for the plot

target.time

a numeric value corresponding to some observed time in data

style

graphical backend, can be 'ggplot' or 'generic'

log.scale

if TRUE, displays \(X\)-axis in log-scale

remove.someLabels

if TRUE, removes 75% of X-axis labels in 'ggplot' style to avoid the label overlap

addlegend

if TRUE, adds a default legend to the plot

...

Further arguments to be passed to generic methods

Details

The function plots the observed values of the survival probability at a given time point as a function of concentration. The 95 % binomial confidence interval is added to each survival probability. It is calculated using function binom.test from package stats. Replicates are systematically pooled in this plot.

See Also

binom.test