MoveStack-class: The MoveStack class

Description

The MoveStack object is a stack of move objects. A MoveStack object can be created with the functions move, moveStack, getMovebankData or getDataRepositoryData

Arguments

Slots

bbox: belongs to the SpatialPointsDataFrame
citation: Object of class "character": how to cite the study, when Movebank data are used
coords: coordinates of the track, belongs to the SpatialPointsDataFrame
coords.nrs: belongs to the SpatialPointsDataFrame
data: Object of class "data.frame": additional data associated to the coordinates
dataUnUsedRecords: Object of class "data.frame": data associated to the unused records
dateCreation: Object of class "POSIXct": timestamp when the MoveStack object was created
idData: Object of class "data.frame": additional (one row) data. These data contain information associated to the animal
license: Object of class "character": the license under which the data were published, when Movebank data are used
proj4string: Object of class "CRS": projection of the coordinates
sensor: Object of class "factor": sensors used to record the coordinates
sensorUnUsedRecords: Object of class "factor": sensors used to record the unused records
study: Object of class "character": name of the study, when Movebank data are used
timestamps: Object of class "POSIXct": timestamps associated to the coordinates
timestampsUnUsedRecords: Object of class "POSIXct": timestamps associated to the unused records, i.e. lines of the data that were removed because they included NA locations
trackId: Object of class "factor": vector that indicates, which data, coordinates and timestamps belong to each individual
trackIdUnUsedRecords: Object of class "factor": vector that indicates, which data, coordinates and timestamps of the unused records belong to each individual

Methods

angle: signature(object = "MoveStack"): calculates angles between consecutive locations
as.data.frame: signature(object = "MoveStack"): extracts the spatial data frame
brownian.bridge.dyn: signature(object = "MoveStack"): calculates the utilization distribution (UD) of the given track using the dynamic Brownian Bridge Movement Model
brownian.motion.variance.dyn: signature(object = "MoveStack"): calculates the motion variance of the dynamic Brownian Bridge Movement Model
citations: signature(object = "MoveStack"): extracts or sets the citation
coordinates: signature(object = "MoveStack"): extracts the coordinates from the track
corridor: signature(object = "MoveStack"): identifies track segments whose attributes suggest corridor use behavior
distance: signature(object = "MoveStack"): calculates distances between consecutive locations
equalProj: signature(object = "MoveStack"): checks whether all objects of a list are in the same projection
hrBootstrap: signature(object = "MoveStack"): calculates and plots the area of the Minimum Convex Polygon of a track
idData: signature(object = "MoveStack"): returns or replaces the idData slot
lines: signature(object = "MoveStack"): add lines of the track of the animals to a plot
move2ade: signature(object = "MoveStack"): converts to a adehabitat compatible object
moveStack: signature(object = "MoveStack"): stacks a list of MoveStack objects
n.indiv: signature(object = "MoveStack"): returns the number of individuals
n.locs: signature(object = "MoveStack"): calculates number of locations
plot: signature(object = "MoveStack"): plots the track of the animals
points: signature(object = "MoveStack"): add points of the track of the animals to a plot
seglength: signature(object = "MoveStack"): calculates the length of each segment of a track
sensor: signature(object = "MoveStack"): extracts the sensor(s) used to record the coordinates
show: signature(object = "MoveStack"): displays summary the MoveStack object
speed: signature(object = "MoveStack"): calculates speed between consecutive locations
split: signature(object = "MoveStack"): splits a MoveStack into a list of Move objects
spTransform: signature(object = "MoveStack"): transforms coordinates to a different projection method
summary: signature(object = "MoveStack"): summarizes the information of MoveStack object
subset: signature(object = "MoveStack"): subsets the MoveStack object
timeLag: signature(object = "MoveStack"): calculates time lag between consecutive locations
timestamps: signature(object = "MoveStack"): gets the timestamps associated to the coordinates
trackId: signature(object = "MoveStack"): returning the Id of the individual per coordinate
turnAngleGc: signature(object = "MoveStack"): calculates angles between consecutive locations
unUsedRecords: signature(object = "MoveStack"): returns the unUsedRecordsStack object containing the data of the unused records