mpMap (version 1.14)

fillmiss: Fill in missing values for an mpcross object

Description

Use multi-point founder probabilities to fill in the most likely value for a missing genotype

Usage

fillmiss(object, threshold = 0.7, dart = FALSE)

Arguments

object

Object of class mpcross

threshold

Threshold for probability to call an allele

dart

Flag for whether genotypes are coded as 0/1; shortcut for computation if true

Value

An mpcross object with a new component $missfinals for the original set of genotypes. The component $finals is replaced by the imputed values.

See Also

mpprob, mpcross