mpMap (version 1.14)

summary.mpcross: Summary of mpcross object

Description

Summarizes mpcross object in terms of number of markers, lines, type of markers, and quality of markers

Usage

"summary" (object, ...)

Arguments

object

Object of class mpcross

...

Additional arguments

Value

Printed summary including - markers which had to be removed due to monomorphic or missing founders; numbers of biallelic/multiallelic markers; percent of markers with missing data; percent of markers with high segregation distortion.

See Also

mpcross

Examples

sim.map <- sim.map(len=rep(100, 2), n.mar=11, include.x=FALSE, eq.spacing=TRUE)
sim.ped <- sim.mpped(4, 1, 500, 6, 1)
sim.dat <- sim.mpcross(map=sim.map, pedigree=sim.ped, qtl=matrix(data=c(1, 10, .4, 0, 0, 0, 1, 70, 0, .35, 0, 0), nrow=2, ncol=6, byrow=TRUE), seed=1)
summary(sim.dat)