Import model estimates from a NONMEM ext file
nmext(
run = NA_real_,
project = getwd(),
file = paste0(run, ".ext"),
path = NULL,
root = c("working", "cppfile"),
index = "last",
theta = TRUE,
omega = TRUE,
sigma = TRUE,
olabels = NULL,
slabels = NULL,
oprefix = "",
sprefix = "",
tname = "THETA",
oname = "...",
sname = "...",
read_fun = "data.table",
env = NULL
)
run number.
project directory.
deprecated; use path
instead.
full path to NONMEM ext
file.
the directory that path
and project
are relative to; this is
currently limited to the working
directory or cppdir
, the directory
where the model file is located.
the estimation number to return; "last" will return the last estimation results; otherwise, pass an integer indicating which estimation results to return.
logical; if TRUE, the $THETA
vector is returned.
logical; if TRUE, the $OMEGA
matrix is returned.
logical; if TRUE, the $SIGMA
matrix is returned.
labels for $OMEGA
.
labels for $SIGMA
.
prefix for $OMEGA
labels.
prefix for $SIGMA
labels.
name for $THETA
.
name for $OMEGA
.
name for $SIGMA
.
function to use when reading the ext
file.
internal use only.
nmxml()
, read_nmext()