Multiple Sequence Alignment
Description
The 'msa' package provides a unified R/Bioconductor interface to
the multiple sequence alignment algorithms ClustalW, ClustalOmega,
and Muscle. All three algorithms are integrated in the package,
therefore, they do not depend on any external software tools
and are available for all major platforms. The multiple sequence
alignment algorithms are complemented by a function for
pretty-printing multiple sequence alignments using the LaTeX
package TeXshade.