makeAA

Given a pedigree, the matrix of additive by additive genetic relatedness
(AA) among all individuals in the pedigree is returned.

Constructs (non)additive genetic relationship matrices, and their
inverses, from a pedigree to be used in linear mixed effect models (A.K.A.
the 'animal model'). Also includes other functions to facilitate the use of
animal models. Some functions have been created to be used in conjunction
with the R package 'asreml' for the 'ASReml' software, which can be
obtained upon purchase from 'VSN' international
(<https://vsni.co.uk/software/asreml>).

Matthew Wolak

nadiv

(Non)Additive Genetic Relatedness Matrices

makeAA function

<dl><dt>pedigree</dt>
<dd>A pedigree where the columns are ordered ID, Dam, Sire</dd></dl>

Arguments

<a href="/link/matthewwolak%40gmail.com?package=nadiv&version=2.18.0" data-mini-rdoc="nadiv::matthewwolak@gmail.com">matthewwolak@gmail.com</a>

Author

Creates the additive by additive epistatic genetic relationship matrix — makeAA

<dl>

<dt>pedigree</dt>
<dd>A pedigree where the columns are ordered ID, Dam, Sire</dd>

</dl>

<a href='mailto:matthewwolak@gmail.com'>matthewwolak@gmail.com</a>

makeAA: Creates the additive by additive epistatic genetic relationship matrix

Description

Usage

Value

Arguments

Author

Details

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Examples