edgelist

<p>A data frame of edges, each row corresponding to one edge</p>

datasets

Carry out network-based gene set analysis by incorporating external information about interactions among genes, as well as novel interactions learned from data. Implements methods described in Shojaie A, Michailidis G (2010) <doi:10.1093/biomet/asq038>, Shojaie A, Michailidis G (2009) <doi:10.1089/cmb.2008.0081>, and Ma J, Shojaie A, Michailidis G (2016) <doi:10.1093/bioinformatics/btw410>.

Michael Hellstern

netgsa

Network-Based Gene Set Analysis

Ali Shojaie

Jing Ma

Kun Yue

edgelist function

<p>An object of class <code>data.frame</code> with 19 rows and 4 columns.</p>

Format

A data frame of edges, each row corresponding to one edge — edgelist

A data frame of edges, each row corresponding to one edge

edgelist: A data frame of edges, each row corresponding to one edge

Description

Usage

Arguments

Format