pathways

datasets

Carry out network-based gene set analysis by incorporating external information about interactions among genes, as well as novel interactions learned from data. Implements methods described in Shojaie A, Michailidis G (2010) <doi:10.1093/biomet/asq038>, Shojaie A, Michailidis G (2009) <doi:10.1089/cmb.2008.0081>, and Ma J, Shojaie A, Michailidis G (2016) <doi:10.1093/bioinformatics/btw410>.

Michael Hellstern

netgsa

Network-Based Gene Set Analysis

Ali Shojaie

Jing Ma

Kun Yue

pathways function

<p>An object of class <code>list</code> of length 100.</p>

Format

A list of KEGG pathways — pathways

A list of KEGG pathways

pathways: A list of KEGG pathways

Description

Usage

Arguments

Format