pathways_mat

datasets

Carry out network-based gene set analysis by incorporating external information about interactions among genes, as well as novel interactions learned from data. Implements methods described in Shojaie A, Michailidis G (2010) <doi:10.1093/biomet/asq038>, Shojaie A, Michailidis G (2009) <doi:10.1089/cmb.2008.0081>, and Ma J, Shojaie A, Michailidis G (2016) <doi:10.1093/bioinformatics/btw410>.

Michael Hellstern

netgsa

Network-Based Gene Set Analysis

Ali Shojaie

Jing Ma

Kun Yue

pathways_mat function

<p>An object of class <code>matrix</code> (inherits from <code>array</code>) with 51 rows and 250 columns.</p>

Format

Matrix with pathway indicators — pathways_mat

Matrix with pathway indicators

pathways_mat: Matrix with pathway indicators

Description

Usage

Arguments

Format