robust_window

Takes an image, finds the quantiles given by 
<code>probs</code>, then sets values outside these values to other 
values, as determined by <code>replace</code> argument passed to
to <code>window_img</code>

Base package for 'Neuroconductor', which includes many helper
functions that interact with objects of class 'nifti', implemented by
package 'oro.nifti', for reading/writing and also other manipulation
functions.

John Muschelli

neurobase

'Neuroconductor' Base Package with Helper Functions for 'nifti'
Objects

robust_window function

<dl><dt>img</dt>
<dd>object of class nifti</dd>
<dt>non_zero</dt>
<dd>Should zeroes be excluded from the calculation
of quantiles?</dd>
<dt>probs</dt>
<dd>quantiles to constrain the image these define the window sent to <code>window_img</code></dd>
<dt>...</dt>
<dd>additional arguments sent to <code>window_img</code></dd>
<dt>mask</dt>
<dd>binary image to use to to calculate quantiles</dd></dl>

Arguments

Window image based on quantiles of Image — robust_window

<dl>

<dt>img</dt>
<dd>object of class nifti</dd>


<dt>non_zero</dt>
<dd>Should zeroes be excluded from the calculation
of quantiles?</dd>


<dt>probs</dt>
<dd>quantiles to constrain the image these define the window sent to <code>window_img</code></dd>


<dt>...</dt>
<dd>additional arguments sent to <code>window_img</code></dd>


<dt>mask</dt>
<dd>binary image to use to to calculate quantiles</dd>

</dl>

robust_window: Window image based on quantiles of Image

Description

Usage

Value

Arguments