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nproc (version 2.1.5)

Neyman-Pearson (NP) Classification Algorithms and NP Receiver Operating Characteristic (NP-ROC) Curves

Description

In many binary classification applications, such as disease diagnosis and spam detection, practitioners commonly face the need to limit type I error (i.e., the conditional probability of misclassifying a class 0 observation as class 1) so that it remains below a desired threshold. To address this need, the Neyman-Pearson (NP) classification paradigm is a natural choice; it minimizes type II error (i.e., the conditional probability of misclassifying a class 1 observation as class 0) while enforcing an upper bound, alpha, on the type I error. Although the NP paradigm has a century-long history in hypothesis testing, it has not been well recognized and implemented in classification schemes. Common practices that directly limit the empirical type I error to no more than alpha do not satisfy the type I error control objective because the resulting classifiers are still likely to have type I errors much larger than alpha. As a result, the NP paradigm has not been properly implemented for many classification scenarios in practice. In this work, we develop the first umbrella algorithm that implements the NP paradigm for all scoring-type classification methods, including popular methods such as logistic regression, support vector machines and random forests. Powered by this umbrella algorithm, we propose a novel graphical tool for NP classification methods: NP receiver operating characteristic (NP-ROC) bands, motivated by the popular receiver operating characteristic (ROC) curves. NP-ROC bands will help choose in a data adaptive way and compare different NP classifiers.

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Version

Install

install.packages('nproc')

Monthly Downloads

245

Version

2.1.5

License

GPL-2

Maintainer

Last Published

January 13th, 2020

Functions in nproc (2.1.5)

npc

Construct a Neyman-Pearson Classifier from a sample of class 0 and class 1.
nproc

Calculate the Neyman-Pearson Receiver Operating Characteristics
print.npc

Print the npc object.
print.nproc

Print the nproc object.
rocCV

Calculate the Receiver Operating Characteristics with Cross-validation or Subsampling
predict.npc

Predicting the outcome of a set of new observations using the fitted npc object.
plot.nproc

Plot the nproc band(s).
compare

Compare two NP classification methods at different type I error upper bounds.
lines.nproc

Add NP-ROC curves to the current plot object.