Learn R Programming

oce (version 1.0-1)

bremen-class: Class to Store Bremen-formatted Data

Description

This class is for data stored in a format used at Bremen. It is somewhat similar to the odf-class, in the sense that it does not apply just to a particular instrument. Although some functions are provided for dealing with these data (see “Details”), the most common action is to read the data with read.bremen, and then to coerce the object to another storage class (e.g. using as.ctd for CTD-style data) so that specialized functions can be used thereafter.

Arguments

Slots

data

As with all oce objects, the data slot for bremen objects is a list containing the main data for the object.

metadata

As with all oce objects, the metadata slot for bremen objects is a list containing information about the data or about the object itself.

processingLog

As with all oce objects, the processingLog slot for bremen objects is a list with entries describing the creation and evolution of the object. The contents are updated by various oce functions to keep a record of processing steps. Object summaries and processingLogShow both display the log.

Modifying slot contents

Although the [[<- operator may permit modification of the contents of bremen objects (see [[<-,bremen-method), it is better to use oceSetData and oceSetMetadata, because that will save an entry in the processingLog to describe the change.

Retrieving slot contents

The full contents of the data and metadata slots of a bremen object named bremen may be retrieved in the standard R way. For example, slot(bremen, "data") and slot(bremen, "metadata") return the data and metadata slots, respectively. The [[,bremen-method operator can also be used to access slots, with bremen[["data"]] and bremen[["metadata"]], respectively. Furthermore, [[,bremen-method can be used to retrieve named items (and potentially some derived items) within the metadata and data slots, the former taking precedence over the latter in the lookup. It is also possible to find items more directly, using oceGetData and oceGetMetadata, but this cannot retrieve derived items.

See Also

Other classes provided by oce: adp-class, adv-class, argo-class, cm-class, coastline-class, ctd-class, lisst-class, lobo-class, met-class, oce-class, odf-class, rsk-class, sealevel-class, section-class, topo-class, windrose-class

Other things related to bremen data: [[,bremen-method, [[<-,bremen-method, plot,bremen-method, read.bremen, summary,bremen-method