argoNames2oceNames

This function is used internally by <code>read.argo()</code> to convert Argo-convention
data names to oce-convention names. Users should not call this directly, since
its return value may be changed at any moment (e.g. to include units as well
as names).

Supports the analysis of Oceanographic data, including 'ADCP'
measurements, measurements made with 'argo' floats, 'CTD' measurements,
sectional data, sea-level time series, coastline and topographic data, etc.
Provides specialized functions for calculating seawater properties such as
potential temperature in either the 'UNESCO' or 'TEOS-10' equation of state.
Produces graphical displays that conform to the conventions of the
Oceanographic literature. This package is discussed extensively by
Kelley (2018) "Oceanographic Analysis with R" <doi:10.1007/978-1-4939-8844-0>.

Dan Kelley

Analysis of Oceanographic Data

Clark Richards

Chantelle Layton

British Geological Survey 

argoNames2oceNames function

<dl><dt>names</dt>
<dd>vector of character strings containing names in the Argo convention.</dd>
<dt>ignore.case</dt>
<dd>a logical value passed to <code><a href="/link/gsub()?package=oce&version=1.7-10" data-mini-rdoc="oce::gsub()">gsub()</a></code>, indicating whether to
ignore the case of input strings. The default is set to <code>TRUE</code> because some data
files use lower-case names, despite the fact that the Argo documentation specifies
upper-case.</dd></dl>

Arguments

Convert Argo Data Name to Oce Name — argoNames2oceNames

<dl>

<dt>names</dt>
<dd>vector of character strings containing names in the Argo convention.</dd>


<dt>ignore.case</dt>
<dd>a logical value passed to <code><a href='https://rdrr.io/r/base/grep.html'>gsub()</a></code>, indicating whether to
ignore the case of input strings. The default is set to <code>TRUE</code> because some data
files use lower-case names, despite the fact that the Argo documentation specifies
upper-case.</dd>

</dl>

Argo name	oce name
`BBP`	`bbp`
`BETA_BACKSCATTERING`	`betaBackscattering`
`BPHASE_OXY`	`bphaseOxygen`
`CDOM`	`CDOM`
`CNDC`	`conductivity`
`CHLA`	`chlorophyllA`
`CP`	`beamAttenuation`
`CYCLE_NUMBER`	`cycleNumber` (both this and `cycle` are handled by the [[ operator)
`DATA_CENTRE`	`dataCentre`
`DATA_MODE`	`dataMode`
`DATA_STATE_INDICATOR`	`dataStateIndicator`
`DC_REFERENCE`	`DCReference`
`DIRECTION`	`direction`
`DOWN_IRRADIANCE`	`downwellingIrradiance`
`DOWNWELLING_PAR`	`downwellingPAR`
`FIRMWARE_VERSION`	`firmwareVersion`
`FIT_ERROR_NITRATE`	`fitErrorNitrate`
`FLUORESCENCE_CDOM`	`fluorescenceCDOM`
`FLUORESCENCE_CHLA`	`fluorescenceChlorophyllA`
`INST_REFERENCE`	`instReference`
`JULD`	`juld` (and used to compute `time`)
`JULD_QC_LOCATION`	`juldQCLocation`
`LATITUDE`	`latitude`
`LONGITUDE`	`longitude`
`MOLAR_DOXY`	`oxygenUncompensated`
`PH_IN_SITU_FREE`	`pHFree`
`PH_IN_SITU_TOTAL`	`pH`
`PI_NAME`	`PIName`
`PLATFORM_NUMBER`	`id`
`POSITION_ACCURACY`	`positionAccuracy`
`POSITIONING_SYSTEM`	`positioningSystem`
`PROFILE`	`profile`
`PROJECT_NAME`	`projectName`
`RAW_DOWNWELLING_IRRADIANCE`	`rawDownwellingIrradiance`
`RAW_DOWNWELLING_PAR`	`rawDownwellingPAR`
`RAW_UPWELLING_RADIANCE`	`rawUpwellingRadiance`
`STATION_PARAMETERS`	`stationParameters`
`TEMP`	`temperature`
`TEMP_CPU_CHLA`	`temperatureCPUChlorophyllA`
`TEMP_DOXY`	`temperatureOxygen`
`TEMP_NITRATE`	`temperatureNitrate`
`TEMP_PH`	`temperaturePH`
`TEMP_SPECTROPHOTOMETER_NITRATE`	`temperatureSpectrophotometerNitrate`
`TILT`	`tilt`
`TURBIDITY`	`turbidity`
`UP_RADIANCE`	`upwellingRadiance`
`UV_INTENSITY`	`UVIntensity`
`UV_INTENSITY_DARK_NITRATE`	`UVIntensityDarkNitrate`
`UV_INTENSITY_NITRATE`	`UVIntensityNitrate`
`VRS_PH`	`VRSpH`
`WMO_INST_TYPE`	`WMOInstType`

argoNames2oceNames: Convert Argo Data Name to Oce Name

Description

Usage

Value

Arguments

Details

References

See Also