oligo (version 1.36.1)

AlleleSet-class: Class "AlleleSet"

Description

A class for storing the locus-level summaries of the normalized intensities

Objects from the Class

Objects can be created by calls of the form new("AlleleSet", assayData, phenoData, featureData, experimentData, annotation, protocolData, ...).

Extends

Class "eSet", directly. Class "VersionedBiobase", by class "eSet", distance 2. Class "Versioned", by class "eSet", distance 3.

See Also

SnpSuperSet, CNSet

Examples

showClass("AlleleSet")
## an empty AlleleSet
x <- new("matrix")
new("AlleleSet", senseAlleleA=x, senseAlleleB=x, antisenseAlleleA=x, antisenseAlleleB=x)
##or
new("AlleleSet", alleleA=x, alleleB=x)